Cottage holiday rentals in San Juan Islands

Find and book unique cottages on Airbnb

Top-rated cottage rentals in San Juan Islands

Guests agree: these cottages are highly rated for location, cleanliness and more.

%{current} / %{total}1 / 1
Top guest favourite
A fire pit is centered in the foreground, with flames rising against a backdrop of a serene seaside at sunset. The rocky beach and gentle waves reflect the warm hues of the sky, with faint silhouettes of boats visible in the distance.
Cottage in Ferndale
4.97 out of 5 average rating, 280 reviews

Sandy’s Beach House - stunning sunsets!

Don't forget your camera! Waterfront, Sunsets, seals, bald eagles, the Pacific Ocean as far as the eye can see! Just a few of the sights from Sandy's Beach house! Sandy Point is a small community on the lovely shores of Puget Sound. Approx 15 mins from Ferndale, the 'true city’ of Sandy Point, & nearly 20-25mins from Bellingham. Sandy's cabin has two queen bedrooms- & pull-out cot in living room. Perfect for couples or a small group. Dog-$40 fee-2 max. Inform when booking.

Top guest favourite
The cottage features a spacious deck with several black bistro chairs and a table, surrounded by lush greenery. French doors provide access to the interior, and a gas BBQ is positioned nearby for outdoor cooking.
Cottage in Eastsound
4.96 out of 5 average rating, 314 reviews

WaterView,Impeccable Studio Cottage, Walk to Town

With beautiful views of the Salish Sea, our charming cottage is perfect for a solo retreat or a couple's getaway. Just a short walk to restaurants, shops, and a waterfront park, you can enjoy the convenience of town while waking each morning to sunrises from the deck, or the comfy queen-size bed in this perfectly designed studio. Our studio cottage features: ☀️ All-new appliances ☀️ Quartz countertops ☀️ Custom-tiled bathroom ☀️ Luxury linens and amenities Your island escape is ready for you ✨

Top guest favourite
A bright dining area features large windows that frame serene water views. A round table is set with two places, complemented by woven placemats. Natural light enhances the airy ambiance, while the surrounding greenery adds a touch of nature.
Cottage in Lopez Island
5 out of 5 average rating, 274 reviews

Luxury Seaside Romantic Getaway

Welcome to Rosario Cabin! This tranquil, romantic get-away for two on Lopez Island provides everything you'll need for a relaxing stay: private beach access, unobstructed water views, and easy access to many of the Island's best outdoor adventures. This newly renovated cabin features a stocked kitchen, indoor/outdoor dining and seating, and a spacious bedroom. We hope to make your stay as relaxing as possible with soft sheets, toiletries, Nespresso coffee machine, and memory foam mattress!

Top guest favourite
An aerial view captures a secluded lagoon surrounded by lush green trees. Clear waters reflect the vibrant sky, and a sandy shoreline curves along the edge. A path leads to the nearby land, highlighting the private nature of the location.
Cottage in Coupeville
4.98 out of 5 average rating, 124 reviews

Private 2 bedroom Cottage on a Lagoon.

Rare two bedroom Cottage on a Private Lagoon. Centrally located for you to explore the island, or very private for a relaxing get-away. Inside Ebey’s Preserve (A division of the National Parks), this unique location Is full of history. Minutes from Ebey’s State Park, and a short drive to Deception Pass State Park. Eagles, deer, otters, and wildlife out all the windows. Lovely deck overlooking the water, a fire pit patio with waters view. Fantastic get away for a wonderful time on Whidbey.

Top guest favourite
A charming cottage is set amidst greenery, featuring a vibrant mural on one side. A round table with chairs is positioned under a large umbrella on the lawn, inviting outdoor dining. Surrounding trees provide a natural backdrop.
Cottage in Guemes Island
4.98 out of 5 average rating, 239 reviews

Seaside Island Cottage - pets & kids welcome

Love beach walks, sunsets & wildlife viewing? This peaceful island setting is for you! Once off the 5 min ferry ride from Anacortes, you will arrive to our whimsical cottage on the west beach of Guemes with its panoramic views & magical sunsets …the ideal place where you can relax, walk the beaches, find treasures, hike Guemes mountain, explore your favorite water sports, and view our local wildlife of herons, seals, bald eagles, & often orcas. Kids & pets welcome…available mooring buoy.

Top guest favourite
A serene shoreline is depicted, featuring smooth stones and moss-covered rocks. Tall trees frame the scene, with reflections visible in the calm water. Soft fog blankets the distant hills, creating a peaceful atmosphere in the secluded natural setting.
Cottage in Sooke
4.99 out of 5 average rating, 457 reviews

The Covehouse - a secluded oceanfront cottage

A beautiful haven, lost in the woods, found by the sea, surrounded by quiet - the WilderGarden Covehouse is a beguiling retreat for those looking for ... something else. Close to parks, on Galloping Goose trail. Walk to pub or bus stop, 12 min to Sooke, 45 min to Victoria, ferry. Sheltered from storms, on a private cove, the Covehouse has a cedar and glass deck, BBQ, dock, hot tub with view, ocean access. Ideal for 1-2 couples, cyclists, paddlers, nature lovers, families, or business.

Guest favourite
Cottage in Mukilteo
4.95 out of 5 average rating, 129 reviews

Waterview Rabbit Hill Cottage

Escape to this charming cottage with stunning water views from almost every room & a cozy atmosphere. You’ll feel instantly at peace as you settle in to enjoy your vacation. Cozy up by the fireplace or cook a delicious meal in the fully equipped kitchen. The plush beds & soft linens in the beautiful bedrooms offer ultimate comfort. As the sun sets, immerse yourself in the warm bubbles of the hot tub & let your worries melt away or gather around the flickering flames of the fire pit.

Top guest favourite
The exterior of the cottage features a welcoming blue door and large windows that provide ample natural light. A spacious deck is furnished with a dining set, surrounded by greenery, offering views of the surrounding landscape.
Cottage in Anacortes
4.94 out of 5 average rating, 233 reviews

Burrows View Cottage

Great any Season!!! Experience unforgettable sunsets in this beautiful high bank waterfront cottage. Quaint and serene. Close to Deception Pass, downtown Anacortes shops and restaurants, drive to public beaches, less than a mile from Mount Erie and hiking trails. Less than a 10 minute drive to the Anacortes Ferry Dock. Cottage has 2 bedrooms, both with queen beds. Full kitchen with all gadgets required to make that special meal. AIRCONDITIONED SPACE THROUGHOUT HOME.

Guest favourite
A charming cottage sits surrounded by nature, showcasing a light blue exterior and a welcoming front porch. Mountain views are visible in the background, while a gravel pathway leads to the entrance, framed by wooden fences and landscaped fields.
Cottage in Sequim
4.98 out of 5 average rating, 213 reviews

Secluded - Farmland and Mountain VIEW - King Suite

Rejuvenate your soul in your own private luxury cottage on tranquil farmland with breathtaking mountain views and high-speed internet. Just 10 minutes from downtown Sequim, with charming shops and delicious cuisine where lavender farms abound. Adjacent to the bike trail, and good proximity to Olympic National Park. Airplane views abound from the nearby Sequim Valley Airport! NOTE: Washer & Dryer available upon advance request for stays of 3 nights or more =0)

Top guest favourite
A contemporary designed guest house is depicted, featuring a wooden exterior with large windows and a welcoming entrance. Well-tended greenery surrounds the front, including white flowers and plush shrubs. Two lounge chairs are positioned on the patio, inviting relaxation in the serene outdoor space.
Cottage in Friday Harbor
4.99 out of 5 average rating, 144 reviews

Windance Cottage

Northwewst contemporary designed guest house. Lots of sunlight and great views of the Straights, Mountains and an abundance of sea life, eagles, deer, fox, and other wildlife. Private tennis court with basketball hoops. Private cove to launch your kayak or just some great tide pooling. Note; Owners home is on the property. The cottage sets back approximately a football field away from the main house, affording it’s own privacy. Owners are normally always on property.

Top guest favourite
A charming cottage with bright orange siding is showcased, surrounded by lush greenery. A round table with four wooden chairs is positioned on a grassy area, inviting relaxation. The entrance features a single door, complemented by windows that allow natural light.
Cottage in Eastsound
4.97 out of 5 average rating, 269 reviews

Farm cottage, close to Eastsound!

Buckhorn Farm Bungalow is located on ten-acres near the north shore of Orcas Island. This family vacation cottage enjoys a wonderful country-farm atmosphere but is only a 5 minute drive from the village of Eastsound, our island's version of “downtown.” Guests can easily walk or ride bicycles along level roads to restaurants, shops or to the nearby semi-private beach to enjoy beach strolls, tide-pooling and spectacular views from Mt. Baker to Vancouver Island.

Guest favourite
A serene backyard features several white lounge chairs arranged on a grassy area, overlooking a clear view of the water. Tall trees provide shade, and a hammock is visible in the background, enhancing the peaceful outdoor setting.
Cottage in Friday Harbor
4.9 out of 5 average rating, 140 reviews

Cottage by the Sea

Lovely cottage by the sea with private beach access. Amazing views with the whales coming by often. You will also get daily eagle sightings and sunsets like no other. (We also have FAST fiber optic WiFi for those looking to take meetings remotely.) This spot is one of the best you'll find on the island. Come enjoy this nestled gem on Sunset Point!

Popular amenities for cottage rentals in San Juan Islands

Destinations to explore